biotechrabbit™ 14X LYO-ready CAPITAL™ qPCR Probe Master Mix is a ready-to-use and concentrated formulation of all enzymes, dNTPs, excipients, and stabilizers for producing home-made lyophilizates with the option to include primers and probes. The time-effective lyophilization is possible for high and low volumes of the master mix without the collapse of the lyophilizate. The resulting lyophilizate is highly resistant to humidity and is swiftly dissolved in the provided reconstitution buffer.
The master mix is optimized for real-time PCR quantification of viral DNA, cDNA and genomic DNA from a wide range of targets. The mix ensures high specificity and sensitivity in single and multiplex amplification, making it the best choice for extremely low-copy-number targets in pathogen detection.
CAPITAL qPCR Probe Master Mix uses a proprietary enzyme and buffer formulation suitable for fast extension and multiplexing in challenging PCR reactions.
|
Component |
Composition |
|
14X LYO-ready CAPITAL™ qPCR Probe Master Mix |
14X concentrated formulation of a qPCR Probe Master Mix including excipients, ready for lyophilization |
|
4X qPCR Probe Reconstitution Buffer |
Optimized PCR reconstitution buffer in 4X concentration |
|
Storage |
−20 °C (until expiry date, see product label) |
Handling
Prevention of contamination
Contamination with undesired DNA is a concern when assembling the amplification reactions. To eliminate the possibility of contamination with undesired DNA, follow the guidelines below:
- Wear disposable gloves when handling the solutions.
- Dedicate separate sterile areas for the preparation of samples and reaction mixtures.
- Use molecular-grade nuclease-free water and reagents.
- Include a non-template control reaction in every PCR assay.
- Avoid carryover contamination.
Recommendations before starting a lyophilization project
- The formulation is optimized for freeze-drying a minimum of 5 reactions of 20 µl.
- Optional: Prepare concentrated primers and probes in molecular biology grade water and restrict the volume to 20 % of the master mix.
Calculation examples
Three calculation examples for 20 µl reaction size
Parameter |
Example A |
Example B |
Example C |
qPCR volume |
20 µl |
20 µl |
20 µl |
Reactions per bead/cake |
5 |
50 |
100 |
Number of beads/cakes |
1 |
10 |
50 |
Total number of reactions |
5 |
500 |
5000 |
Total reaction volume |
100 µl |
10 ml |
100 ml |
Pipetting scheme
Divide the total reaction volume above by a factor of 14. Minimize the volume of primers and probes.
Component |
Example A |
Example B |
Example C |
14X LYO-ready CAPITAL™ qPCR Probe Master Mix |
7.1 µl |
71 µl |
7.1 ml |
Optional: Primer & Probes (max. 20 % v/v) |
1.4 µl |
14 µl |
1.4 ml |
Volume to freeze-dry per bead/cake |
8.5 µl |
85 µl |
170 µl |
Suggested lyophilization protocol
Step |
Time* |
Temperature |
Pressure |
Freezing |
120 min |
−40 °C |
— |
Primary drying |
600 min |
−40 °C |
0.12 mbar / 12 Pa |
Secondary drying |
300 min |
25 °C |
0.01 mbar / 1 Pa |
*Duration of freeze-drying cycles depends on the lyophilizate volume, the equipment, and the type and dimensions of the vials.
Reconstitution of lyophilized master mix
- Add the required volume of the reconstitution buffer to the lyophilized CAPITAL™ qPCR Probe Master Mix.
- Mix well. The lyophilizate should dissolve swiftly.
- Store the reconstituted CAPITAL™ qPCR Probe Master Mix at −20 °C.
Parameter |
Example A |
Example B |
Example C |
4X Reconstitution Buffer per bead/cake |
25 µl |
250 µl |
500 µl |
Total volume of 4X Reconstitution Buffer |
25 µl |
2.5 ml |
25 ml |
Cycling program
Step |
Temperature |
Time |
Cycles |
Initial activation |
95 °C |
3 min |
1 |
Denaturation |
95 °C |
10 s |
40–45 |
Annealing/Extension* |
60–68 °C* |
30 s |
*Recommended annealing/extension temperature is primer Tm +2 °C. Use gradient PCR to optimize the annealing temperature. Do not use temperatures below 60 °C.
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